Stem-loop ssc-mir-7140

Accession

MI0023573

Description

Sus scrofa ssc-mir-7140 precursor miRNA

Literature search

1 open access papers mention ssc-mir-7140
(2 sentences)

Sequence

CAACUCAAGGGGGCAUCAUUCAcuucauagucucugugaAUGAUGCCCCUUAGAGUUGAGC
((((((.((((((((((((((((............)))))))))))))))).))))))...

Structure

---      A                uucau 
   CAACUC AGGGGGCAUCAUUCAc     a
   |||||| ||||||||||||||||      
   GUUGAG UUCCCCGUAGUAagug     g
CGA      A                ucucu 

Annotation confidence Not enough data

Genome context

chr17: 39852404-39852464 [+]

Mature ssc-miR-7140-5p

• Accession: MIMAT0028155
• Description: Sus scrofa ssc-miR-7140-5p mature miRNA
• Sequence: 1 - CAACUCAAGGGGGCAUCAUUCA - 22
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-7140-3p

• Accession: MIMAT0028156
• Description: Sus scrofa ssc-miR-7140-3p mature miRNA
• Sequence: 40 - AUGAUGCCCCUUAGAGUUGAGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22953717
   Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
   Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
   BMC Genomics (2012) 13:459