Stem-loop ssc-mir-7144

Accession

MI0023577

Description

Sus scrofa ssc-mir-7144 precursor miRNA

Literature search

1 open access papers mention ssc-mir-7144
(1 sentences)

Sequence

9628 reads, 6.0 reads per million, 182 experiments

ACUUUCCCGGGAUUUGGAGCGcuuccgcacgcgCUCCUUGUCCCGAGACCGCGA
....((.((((((..(((((((........)))))))..)))))).))......

Structure

--ACUU  C      UU       uuc 
      UC CGGGAU  GGAGCGc   c
      || ||||||  |||||||    
      AG GCCCUG  CCUCgcg   g
AGCGCC  A      UU       cac 

Annotation confidence High

Genome context

chr11: 81643736-81643789 [+]

Mature ssc-miR-7144-5p

• Accession: MIMAT0028163
• Description: Sus scrofa ssc-miR-7144-5p mature miRNA
• Sequence: 1 - ACUUUCCCGGGAUUUGGAGCG - 21
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-7144-3p

• Accession: MIMAT0028164
• Description: Sus scrofa ssc-miR-7144-3p mature miRNA
• Sequence: 34 - CUCCUUGUCCCGAGACCGCGA - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22953717
   Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
   Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
   BMC Genomics (2012) 13:459