Stem-loop dre-mir-7147

Accession

MI0023606

Description

Danio rerio dre-mir-7147 precursor miRNA

Literature search

3 open access papers mention dre-mir-7147
(4 sentences)

Sequence

29992 reads, 10.0 reads per million, 208 experiments

gagugcccagugcUGUACCAUGCUGGUAGCCAGUAugaaauagggcuugCUGGUAACCAGCGUUGUGCCCCacugguugcuc
(((((.((((((..((((.((((((((.(((((((.(........).))))))).)))))))).))))..)))))).)))))

Structure

     c      cU    C        A       u aaa 
gagug ccagug  GUAC AUGCUGGU GCCAGUA g   u
||||| ||||||  |||| |||||||| ||||||| |    
cucgu ggucaC  CGUG UGCGACCA UGGUCgu c   a
     u      CC    U        A       u ggg 

Annotation confidence High

Genome context

chr24: 10948064-10948145 [-]

Mature dre-miR-7147-5p

• Accession: MIMAT0028205
• Description: Danio rerio dre-miR-7147-5p mature miRNA
• Sequence: 14 - UGUACCAUGCUGGUAGCCAGUA - 35
• Evidence: experimental ; Illumina [1]

Mature dre-miR-7147-3p

• Accession: MIMAT0052805
• Description: Danio rerio dre-miR-7147-3p mature miRNA
• Sequence: 50 - CUGGUAACCAGCGUUGUGCCCC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22408181
   Transcriptome-wide analysis of small RNA expression in early zebrafish development
   "Wei C, Salichos L, Wittgrove CM, Rokas A, Patton JG"
   "RNA (2012) 18:915-929