Stem-loop dre-mir-7148

Accession

MI0023607

Description

Danio rerio dre-mir-7148 precursor miRNA

Literature search

2 open access papers mention dre-mir-7148
(3 sentences)

Sequence

10365 reads, 16.0 reads per million, 238 experiments

gcuaauacuaguaAUGGAAAUACUCGCUGAUACUGcaagaauuguggcaucggUAUAAGCCAGUAUUUCCGAUACUaguauuggu
(((((((((((((.((((((((((.(((.((((((...............)))))).))).)))))))))).)))))))))))))

Structure

             A          C   G      caagaa 
gcuaauacuagua UGGAAAUACU GCU AUACUG      u
||||||||||||| |||||||||| ||| ||||||      u
ugguuaugaUCAU GCCUUUAUGA CGA UAUggc      g
             A          C   A      uacggu 

Annotation confidence High

Genome context

chr2: 57103401-57103485 [-]

Mature dre-miR-7148-5p

• Accession: MIMAT0028206
• Description: Danio rerio dre-miR-7148-5p mature miRNA
• Sequence: 14 - AUGGAAAUACUCGCUGAUACUG - 35
• Evidence: experimental ; Illumina [1]

Mature dre-miR-7148-3p

• Accession: MIMAT0028207
• Description: Danio rerio dre-miR-7148-3p mature miRNA
• Sequence: 54 - UAUAAGCCAGUAUUUCCGAUACU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22408181
   Transcriptome-wide analysis of small RNA expression in early zebrafish development
   "Wei C, Salichos L, Wittgrove CM, Rokas A, Patton JG"
   "RNA (2012) 18:915-929