Stem-loop dre-mir-1306

Accession

MI0023609

Description

Danio rerio dre-mir-1306 precursor miRNA

Literature search

2 open access papers mention dre-mir-1306
(4 sentences)

Sequence

6919 reads, 7.0 reads per million, 218 experiments

uccaCCACCUCCCCUGCAAACGUCCAgugacgcagaggaaaugGACGUUAGCUCUGGUGGUGAUggaca
((((.((((.((...((.((((((((.(..(.....)..).)))))))).))...)).)))).))))..

Structure

--    C    U  CCU  A        g ga g 
  ucca CACC CC   GC AACGUCCA u  c c
  |||| |||| ||   || |||||||| |  | a
  aggU GUGG GG   CG UUGCAGgu a  g g
ac    A    U  UCU  A        a ag a 

Annotation confidence High

Genome context

chr5: 24521682-24521750 [+]

Mature dre-miR-1306-5p

• Accession: MIMAT0028210
• Description: Danio rerio dre-miR-1306-5p mature miRNA
• Sequence: 5 - CCACCUCCCCUGCAAACGUCCA - 26
• Evidence: experimental ; Illumina [1]

Mature dre-miR-1306-3p

• Accession: MIMAT0052806
• Description: Danio rerio dre-miR-1306-3p mature miRNA
• Sequence: 44 - GACGUUAGCUCUGGUGGUGAU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22408181
   Transcriptome-wide analysis of small RNA expression in early zebrafish development
   "Wei C, Salichos L, Wittgrove CM, Rokas A, Patton JG"
   "RNA (2012) 18:915-929