Stem-loop mdo-mir-181a-2

Accession

MI0023752

Description

Monodelphis domestica mdo-mir-181a-2 precursor miRNA

Sequence

1505315 reads, 26750 reads per million, 5 experiments

AACAUUCAACGCUGUCGGUGAGUuuuuagauuuaaaagaaaCCAUCGACCGUUGACUGUGCC
.(((.((((((..(((((((.((((((.........))))))))))))))))))).)))...

Structure

--A   U      CU       A      aga 
   ACA UCAACG  GUCGGUG GUuuuu   u
   ||| ||||||  ||||||| ||||||   u
   UGU AGUUGC  CAGCUAC Caaaga   u
CCG   C      --       -      aaa 

Annotation confidence Medium

Genome context

chr1: 419148106-419148167 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-181a-2

Mature mdo-miR-181a-5p

• Accession: MIMAT0004154
• Description: Monodelphis domestica mdo-miR-181a-5p mature miRNA
• Sequence: 1 - AACAUUCAACGCUGUCGGUGAGU - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-181a-2-3p

• Accession: MIMAT0031045
• Description: Monodelphis domestica mdo-miR-181a-2-3p mature miRNA
• Sequence: 42 - CCAUCGACCGUUGACUGUGCC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45