miRBase entry: mdo-mir-29a-2

Stem-loop mdo-mir-29a-2


Accession
MI0023759
Description
Monodelphis domestica mdo-mir-29a-2 precursor miRNA


Sequence

30022 reads, 668.0 reads per million, 5 experiments
CCGAUUUCUCUUGGUGUUCAGAgucuguuuuugucUAGCACCAUUUGAAAUCGGUUAU
((((((((...(((((((.(((...........))))))))))...))))))))....

Structure
----        UCU       C   gucu 
    CCGAUUUC   UGGUGUU AGA    g
    ||||||||   ||||||| |||    u
    GGCUAAAG   ACCACGA Ucu    u
UAUU        UUU       -   guuu 


Annotation confidence Not enough data
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Genome context
ref|NC_077228.1|: 112922659-112922716 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-29a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-29a-2-5p

Accession MIMAT0031023
Description Monodelphis domestica mdo-miR-29a-2-5p mature miRNA
Sequence 1 - CCGAUUUCUCUUGGUGUUCAGA - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-29a-3p

Accession MIMAT0004164
Description Monodelphis domestica mdo-miR-29a-3p mature miRNA
Sequence 36 - UAGCACCAUUUGAAAUCGGUUAU - 58
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45