Stem-loop mdo-mir-29a-2

Accession

MI0023759

Description

Monodelphis domestica mdo-mir-29a-2 precursor miRNA

Sequence

22711 reads, 380 reads per million, 5 experiments

CCGAUUUCUCUUGGUGUUCAGagucuguuuuugucUAGCACCAUUUGAAAUCGGUU
((((((((...(((((((.(((...........))))))))))...))))))))..

Structure

--        UCU       C   gucu 
  CCGAUUUC   UGGUGUU AGa    g
  ||||||||   ||||||| |||    u
  GGCUAAAG   ACCACGA Ucu    u
UU        UUU       -   guuu 

Annotation confidence High

Genome context

chr2: 114183793-114183848 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-29a-2

Mature mdo-miR-29a-3p

• Accession: MIMAT0004164
• Description: Monodelphis domestica mdo-miR-29a-3p mature miRNA
• Sequence: 36 - UAGCACCAUUUGAAAUCGGUU - 56
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-29a-2-5p

• Accession: MIMAT0031023
• Description: Monodelphis domestica mdo-miR-29a-2-5p mature miRNA
• Sequence: 1 - CCGAUUUCUCUUGGUGUUCAG - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45