Stem-loop mdo-mir-30c-1

Accession

MI0023768

Description

Monodelphis domestica mdo-mir-30c-1 precursor miRNA

Sequence

132138 reads, 2522.0 reads per million, 5 experiments

UGUAAACAUCCUACACUCUCAGCUguggaaagucagaaagCUGGGAGAAGGCUGUUACUCU
.((((.((.(((...(((((((((...((...))....))))))))).))).))))))...

Structure

--U    A  U   ACA         -gug  a 
   GUAA CA CCU   CUCUCAGCU    ga  
   |||| || |||   |||||||||    || a
   CAUU GU GGA   GAGGGUCga    cu  
UCU    -  C   --A         aaga  g 

Annotation confidence High

Genome context

ref|NC_077228.1|: 321883285-321883346 [-]

Mature mdo-miR-30c-5p

• Accession: MIMAT0028502
• Description: Monodelphis domestica mdo-miR-30c-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCUCAGCU - 24
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-30c-1-3p

• Accession: MIMAT0028503
• Description: Monodelphis domestica mdo-miR-30c-1-3p mature miRNA
• Sequence: 41 - CUGGGAGAAGGCUGUUACUCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45