Stem-loop mdo-mir-7270

Accession

MI0023772

Description

Monodelphis domestica mdo-mir-7270 precursor miRNA

Sequence

55900 reads, 838 reads per million, 5 experiments

UAAGAUCACAGAGUCUGAAGAGUcugaaaccugacUCCAGGUCUGGUGUGAUCUUGUG
((((((((((.((((((..(((((........))))))))).))..))))))))))..

Structure

--          -G  -    AA     uga 
  UAAGAUCACA  AG UCUG  GAGUc   a
  ||||||||||  || ||||  |||||    
  GUUCUAGUGU  UC GGAC  CUcag   a
GU          GG  U    --     ucc 

Annotation confidence High

Genome context

chr2: 541551023-541551080 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mdo-mir-7270

Mature mdo-miR-7270-5p

• Accession: MIMAT0028510
• Description: Monodelphis domestica mdo-miR-7270-5p mature miRNA
• Sequence: 1 - UAAGAUCACAGAGUCUGAAGAGU - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7270-3p

• Accession: MIMAT0028511
• Description: Monodelphis domestica mdo-miR-7270-3p mature miRNA
• Sequence: 36 - UCCAGGUCUGGUGUGAUCUUGUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45