Stem-loop mdo-mir-7280

Accession

MI0023785

Description

Monodelphis domestica mdo-mir-7280 precursor miRNA

Sequence

28439 reads, 479 reads per million, 5 experiments

CAGCAGAGAGCACGGAGCCGCGAgcccagacagcagcgCAUGCCCCGAACUCUCUGCCACC
..((((((((..(((.(((((..((.......)).)))...)).)))..))))))))....

Structure

--CA        CA   A  ---   GA  cc 
    GCAGAGAG  CGG GC   CGC  gc  a
    ||||||||  ||| ||   |||  ||  g
    CGUCUCUC  GCC CG   gcg  cg  a
CCAC        AA   C  UAC   -a  ac 

Annotation confidence Medium

Genome context

chr2: 339814390-339814450 [+]

Mature mdo-miR-7280-5p

• Accession: MIMAT0028534
• Description: Monodelphis domestica mdo-miR-7280-5p mature miRNA
• Sequence: 1 - CAGCAGAGAGCACGGAGCCGCGA - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7280-3p

• Accession: MIMAT0028535
• Description: Monodelphis domestica mdo-miR-7280-3p mature miRNA
• Sequence: 39 - CAUGCCCCGAACUCUCUGCCACC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45