Stem-loop mdo-mir-199b-2

Accession

MI0023791

Description

Monodelphis domestica mdo-mir-199b-2 precursor miRNA

Sequence

25780 reads, 648.0 reads per million, 5 experiments

CCCAGUGUUCAGACUACCUGUUCAggacaaugcuguuguACAGUAGUCUGCACAUUGGUUA
.(((((((.((((((((.(((....((((....))))..))))))))))).)))))))...

Structure

--C       U        C   UCAg    a 
   CCAGUGU CAGACUAC UGU    gaca u
   ||||||| |||||||| |||    ||||  
   GGUUACA GUCUGAUG ACA    uugu g
AUU       C        -   --ug    c 

Annotation confidence High

Genome context

ref|NC_077228.1|: 66985525-66985585 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-199b-2

Mature mdo-miR-199b-2-5p

• Accession: MIMAT0031065
• Description: Monodelphis domestica mdo-miR-199b-2-5p mature miRNA
• Sequence: 1 - CCCAGUGUUCAGACUACCUGUUCA - 24
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-199b-3p

• Accession: MIMAT0026678
• Description: Monodelphis domestica mdo-miR-199b-3p mature miRNA
• Sequence: 40 - ACAGUAGUCUGCACAUUGGUUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45