miRBase entry: mdo-mir-199b-2

Stem-loop mdo-mir-199b-2

Accession

MI0023791

Description

Monodelphis domestica mdo-mir-199b-2 precursor miRNA

Sequence

30603 reads, 688 reads per million, 5 experiments

CCAGUGUUCAGACUACCUGUUCaggacaaugcuguuguACAGUAGUCUGCACAUUGGUU
(((((((.((((((((.(((....((((....))))..))))))))))).)))))))..

Structure

--       U        C   UCag    a 
  CCAGUGU CAGACUAC UGU    gaca u
  ||||||| |||||||| |||    ||||  
  GGUUACA GUCUGAUG ACA    uugu g
UU       C        -   --ug    c

Annotation confidence Low

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Genome context

chr2: 64374175-64374233 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-199b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mdo-miR-199b-3p

Accession	MIMAT0026678
Description	Monodelphis domestica mdo-miR-199b-3p mature miRNA
Sequence	39 - ACAGUAGUCUGCACAUUGGUU - 59
Evidence	experimental Illumina [1]
Database links
Predicted targets

Mature mdo-miR-199b-2-5p

Accession	MIMAT0031065
Description	Monodelphis domestica mdo-miR-199b-2-5p mature miRNA
Sequence	1 - CCAGUGUUCAGACUACCUGUUC - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 23034410
Birth and expression evolution of mammalian microRNA genes
"Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
"Genome Res (2013) 23:34-45