miRBase entry: mdo-mir-181b-3

Stem-loop mdo-mir-181b-3


Accession
MI0023796
Description
Monodelphis domestica mdo-mir-181b-3 precursor miRNA


Sequence

132727 reads, 2336 reads per million, 5 experiments
AACAUUCAUUGCUGUCGGUGGGUugugagaucugaggaaaaacUCACCGAUGGAUGAAUGUCAC
.((((((((..(((((((((((((................)))))))))))))))))))))...

Structure
--A        UG             gugagau 
   ACAUUCAU  CUGUCGGUGGGUu       c
   ||||||||  |||||||||||||        
   UGUAAGUA  GGUAGCCACUcaa       u
CAC        --             aaaggag 


Annotation confidence High
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Genome context
chr3: 446461129-446461192 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-181b-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-181b-5p

Accession MIMAT0004155
Description Monodelphis domestica mdo-miR-181b-5p mature miRNA
Sequence 1 - AACAUUCAUUGCUGUCGGUGGGU - 23
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mdo-miR-181b-3-3p

Accession MIMAT0031048
Description Monodelphis domestica mdo-miR-181b-3-3p mature miRNA
Sequence 44 - UCACCGAUGGAUGAAUGUCAC - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45