Stem-loop mdo-mir-130b

Accession

MI0023802

Description

Monodelphis domestica mdo-mir-130b precursor miRNA

Sequence

4558 reads, 67 reads per million, 5 experiments

GCUCUUUCCCUGUUGCCCUGCUguccggucaccuagCAGUGCAAUUGUGAAAGGGCAU
((((((((.(.(((((.((((((...((...)))))))).))))).).))))))))..

Structure

--        C U     C      ucc  u 
  GCUCUUUC C GUUGC CUGCUg   gg  
  |||||||| | ||||| ||||||   || c
  CGGGAAAG G UAACG GACgau   cc  
UA        U U     U      ---  a 

Annotation confidence Medium

Genome context

chr3: 511101361-511101418 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-130b

Mature mdo-miR-130b-5p

• Accession: MIMAT0028564
• Description: Monodelphis domestica mdo-miR-130b-5p mature miRNA
• Sequence: 1 - GCUCUUUCCCUGUUGCCCUGCU - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-130b-3p

• Accession: MIMAT0028565
• Description: Monodelphis domestica mdo-miR-130b-3p mature miRNA
• Sequence: 37 - CAGUGCAAUUGUGAAAGGGCAU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45