Stem-loop mdo-mir-130c-2

Accession

MI0023803

Description

Monodelphis domestica mdo-mir-130c-2 precursor miRNA

Sequence

3982 reads, 67 reads per million, 5 experiments

GCCCUUUUCUUGUUGCCCUGCUgagccagcgagggggCAGUGCAAUGUUAAAAGGGCAU
((((((((..((((((.(((((...((.....)).))))).))))))..))))))))..

Structure

--        CU      C     gag  a 
  GCCCUUUU  UGUUGC CUGCU   cc g
  ||||||||  |||||| |||||   || c
  CGGGAAAA  GUAACG GACgg   gg g
UA        UU      U     --g  a 

Annotation confidence Not enough data

Genome context

chr3: 511102163-511102221 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-130c-2

Mature mdo-miR-130c-3p

• Accession: MIMAT0028515
• Description: Monodelphis domestica mdo-miR-130c-3p mature miRNA
• Sequence: 38 - CAGUGCAAUGUUAAAAGGGCAU - 59
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-130c-2-5p

• Accession: MIMAT0031110
• Description: Monodelphis domestica mdo-miR-130c-2-5p mature miRNA
• Sequence: 1 - GCCCUUUUCUUGUUGCCCUGCU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45