Stem-loop mdo-mir-1544c-3

Accession

MI0023919

Description

Monodelphis domestica mdo-mir-1544c-3 precursor miRNA

Sequence

225109 reads, 3921 reads per million, 5 experiments

UGCACCCAGGGAUAUAAUAGCGGuaaacuucaaagaccACUUUUCUAUCCCUGGUACUGGU
.....(((((((((.((.((.(((...........))).)).)).))))))))).......

Structure

--UGCAC         U  U  C   aaac 
       CCAGGGAUA AA AG GGu    u
       ||||||||| || || |||    u
       GGUCCCUAU UU UC cca    c
UGGUCAU         C  U  A   gaaa 

Annotation confidence Low

Genome context

chrX: 13960783-13960843 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from mdo-mir-1544c-3

Mature mdo-miR-1544c-5p

• Accession: MIMAT0028746
• Description: Monodelphis domestica mdo-miR-1544c-5p mature miRNA
• Sequence: 1 - UGCACCCAGGGAUAUAAUAGCGG - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-1544c-3p

• Accession: MIMAT0028747
• Description: Monodelphis domestica mdo-miR-1544c-3p mature miRNA
• Sequence: 39 - ACUUUUCUAUCCCUGGUACUGGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45