Stem-loop mdo-mir-1544e-2

Accession

MI0023924

Description

Monodelphis domestica mdo-mir-1544e-2 precursor miRNA

Sequence

1392 reads, 27 reads per million, 5 experiments

GCGCCCAGGGAUAUAAUAGCGGuaaacuucaaagaccACUUUUCUAUCCCUGGUACUGG
....(((((((((.((.((.(((...........))).)).)).)))))))))......

Structure

--GCGC         U  U  C   aaac 
      CCAGGGAUA AA AG GGu    u
      ||||||||| || || |||    u
      GGUCCCUAU UU UC cca    c
GGUCAU         C  U  A   gaaa 

Annotation confidence Not enough data

Genome context

chrX: 13973354-13973412 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from mdo-mir-1544e-2

Mature mdo-miR-1544e-5p

• Accession: MIMAT0031033
• Description: Monodelphis domestica mdo-miR-1544e-5p mature miRNA
• Sequence: 1 - GCGCCCAGGGAUAUAAUAGCGG - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-1544e-3p

• Accession: MIMAT0031034
• Description: Monodelphis domestica mdo-miR-1544e-3p mature miRNA
• Sequence: 38 - ACUUUUCUAUCCCUGGUACUGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45