Stem-loop mdo-mir-1545b-1

Accession

MI0023926

Description

Monodelphis domestica mdo-mir-1545b-1 precursor miRNA

Sequence

34656 reads, 720 reads per million, 5 experiments

AGUGUUCUGGGAUAGAUAGGCGAucuccuugcaauccACCUUUCCAUCCUGGGCAUUGG
(((((((.(((((.((.(((.(..............).))).)).))))))))))))..

Structure

--       U     A  U   C Aucucc 
  AGUGUUC GGGAU GA AGG G      u
  ||||||| ||||| || ||| |       
  UUACGGG UCCUA CU UCC c      u
GG       -     C  U   A cuaacg 

Annotation confidence High

Genome context

chrX: 13966015-13966073 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from mdo-mir-1545b-1

Mature mdo-miR-1545b-5p

• Accession: MIMAT0028750
• Description: Monodelphis domestica mdo-miR-1545b-5p mature miRNA
• Sequence: 1 - AGUGUUCUGGGAUAGAUAGGCGA - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-1545b-3p

• Accession: MIMAT0028751
• Description: Monodelphis domestica mdo-miR-1545b-3p mature miRNA
• Sequence: 38 - ACCUUUCCAUCCUGGGCAUUGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45