Stem-loop mdo-mir-1545b-3

Accession

MI0023929

Description

Monodelphis domestica mdo-mir-1545b-3 precursor miRNA

Sequence

34513 reads, 724 reads per million, 5 experiments

AGUGUUCUGGGAUAGAUAGGCGAuccccuugcaauccACCUUUCCAUCCCGGGCAUUGG
(((((.(((((((.((.(((.(..............).))).)).))))))))))))..

Structure

--     U       A  U   C Aucccc 
  AGUGU CUGGGAU GA AGG G      u
  ||||| ||||||| || ||| |       
  UUACG GGCCCUA CU UCC c      u
GG     -       C  U   A cuaacg 

Annotation confidence High

Genome context

chrX: 13985682-13985740 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from mdo-mir-1545b-3

Mature mdo-miR-1545b-5p

• Accession: MIMAT0028750
• Description: Monodelphis domestica mdo-miR-1545b-5p mature miRNA
• Sequence: 1 - AGUGUUCUGGGAUAGAUAGGCGA - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-1545b-3-3p

• Accession: MIMAT0031024
• Description: Monodelphis domestica mdo-miR-1545b-3-3p mature miRNA
• Sequence: 38 - ACCUUUCCAUCCCGGGCAUUGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45