Stem-loop mdo-mir-19b-2

Accession

MI0023937

Description

Monodelphis domestica mdo-mir-19b-2 precursor miRNA

Sequence

3861 reads, 79 reads per million, 5 experiments

AGUUUUGCAGGUCUUGCAUCGGCcuaugucaauugcUGUGCAAAUCCAUGCAAAACUGA
(((((((((((..(((((.((((..((....)).)))))))))..)).)))))))))..

Structure

--         -  UC     U    cu  g 
  AGUUUUGCA GG  UUGCA CGGC  au u
  ||||||||| ||  ||||| ||||  ||  
  UCAAAACGU CC  AACGU GUcg  ua c
AG         A  UA     -    -u  a 

Annotation confidence High

Genome context

chrX: 35202389-35202447 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from mdo-mir-19b-2

Mature mdo-miR-19b-3p

• Accession: MIMAT0004170
• Description: Monodelphis domestica mdo-miR-19b-3p mature miRNA
• Sequence: 37 - UGUGCAAAUCCAUGCAAAACUGA - 59
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-19b-2-5p

• Accession: MIMAT0031025
• Description: Monodelphis domestica mdo-miR-19b-2-5p mature miRNA
• Sequence: 1 - AGUUUUGCAGGUCUUGCAUCGGC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45