Stem-loop mdo-mir-20b

Accession

MI0023938

Description

Monodelphis domestica mdo-mir-20b precursor miRNA

Sequence

1969 reads, 43 reads per million, 5 experiments

CAAAGUGCUCAUAGUGCAGGUAGuuuuuugcaaaugacuACUGUACUAUGGGCACUUCAGC
..(((((((((((((((((.(((((..........))))))))))))))))))))))....

Structure

--CA                 G     uuuu 
    AAGUGCUCAUAGUGCAG UAGuu    g
    ||||||||||||||||| |||||     
    UUCACGGGUAUCAUGUC Aucag    c
CGAC                 -     uaaa 

Annotation confidence Low

Genome context

chrX: 35202543-35202603 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from mdo-mir-20b

Mature mdo-miR-20b-5p

• Accession: MIMAT0028764
• Description: Monodelphis domestica mdo-miR-20b-5p mature miRNA
• Sequence: 1 - CAAAGUGCUCAUAGUGCAGGUAG - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-20b-3p

• Accession: MIMAT0028765
• Description: Monodelphis domestica mdo-miR-20b-3p mature miRNA
• Sequence: 40 - ACUGUACUAUGGGCACUUCAGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45