Stem-loop mdo-mir-18b

Accession

MI0023939

Description

Monodelphis domestica mdo-mir-18b precursor miRNA

Sequence

1223 reads, 30 reads per million, 5 experiments

UAAGGUGCAUCUAGUGCAGUUAGugauguaguuuaguaucUACUGCCCUAAAUGCUCCUUCCGGC
.((((.((((.(((.(((((.((..((........))..))))))).))).)))).)))).....

Structure

----U    U    C   U     U  ug  gua 
     AAGG GCAU UAG GCAGU AG  au   g
     |||| |||| ||| ||||| ||  ||    
     UUCC CGUA AUC CGUCA Uc  ug   u
CGGCC    U    A   C     -  ua  auu 

Annotation confidence Low

Genome context

chrX: 35202855-35202919 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from mdo-mir-18b

Mature mdo-miR-18b-5p

• Accession: MIMAT0028766
• Description: Monodelphis domestica mdo-miR-18b-5p mature miRNA
• Sequence: 1 - UAAGGUGCAUCUAGUGCAGUUAG - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-18b-3p

• Accession: MIMAT0028767
• Description: Monodelphis domestica mdo-miR-18b-3p mature miRNA
• Sequence: 41 - UACUGCCCUAAAUGCUCCUUCCGGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45