Stem-loop mdo-mir-15c

Accession

MI0023940

Description

Monodelphis domestica mdo-mir-15c precursor miRNA

Sequence

1473 reads, 65 reads per million, 5 experiments

AGCAGCACGCCAUGGUUUGUAgagauacggugauaCAAACCAUCGUGGGCUGUUAC
((((((.(((.((((((((((..(......)..)))))))))).))).))))))..

Structure

--      A   C          ga au 
  AGCAGC CGC AUGGUUUGUA  g  a
  |||||| ||| ||||||||||  |   
  UUGUCG GUG UACCAAACau  u  c
CA      G   C          ag gg 

Annotation confidence Low

Genome context

chrX: 35734462-35734517 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-15c

Mature mdo-miR-15c-5p

• Accession: MIMAT0028768
• Description: Monodelphis domestica mdo-miR-15c-5p mature miRNA
• Sequence: 1 - AGCAGCACGCCAUGGUUUGUA - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-15c-3p

• Accession: MIMAT0028769
• Description: Monodelphis domestica mdo-miR-15c-3p mature miRNA
• Sequence: 36 - CAAACCAUCGUGGGCUGUUAC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45