Stem-loop mdo-mir-7371j

Accession

MI0023952

Description

Monodelphis domestica mdo-mir-7371j precursor miRNA

Sequence

188 reads, 6.0 reads per million, 5 experiments

CCCUUGUACCAGAUGCUCUAUUguauugagugcugucaaaUAGAGCAUGCUUGUACAAGGUAa
.((((((((.((((((((((((....(((......))))))))))))).)).))))))))...

Structure

--C        C  -          guau   gu 
   CCUUGUAC AG AUGCUCUAUU    uga  g
   |||||||| || ||||||||||    |||   
   GGAACAUG UC UACGAGAUaa    acu  c
aAU        U  G          ----   gu 

Annotation confidence High

Genome context

ref|NC_077235.2|: 53423222-53423284 [-]

Clustered miRNAs

9 other miRNAs are < 10 kb from mdo-mir-7371j

Mature mdo-miR-7371j-5p

• Accession: MIMAT0028790
• Description: Monodelphis domestica mdo-miR-7371j-5p mature miRNA
• Sequence: 1 - CCCUUGUACCAGAUGCUCUAUU - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7371j-3p

• Accession: MIMAT0028791
• Description: Monodelphis domestica mdo-miR-7371j-3p mature miRNA
• Sequence: 41 - UAGAGCAUGCUUGUACAAGGUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45