Stem-loop mdo-mir-7385b

Accession

MI0023976

Description

Monodelphis domestica mdo-mir-7385b precursor miRNA

Sequence

19021 reads, 412 reads per million, 5 experiments

AGGUCUGACAGUCUAUCUUCCuaugcuacuguaaaccuuggAACAUAGUCUAUCGGACCUGG
((((((((.((.((((.((((..(((....)))......)))).)))).)).))))))))..

Structure

--        C  U    C    ----ua   u 
  AGGUCUGA AG CUAU UUCC      ugc a
  |||||||| || |||| ||||      |||  
  UCCAGGCU UC GAUA AAgg      aug c
GG        A  U    C    uuccaa   u 

Annotation confidence High

Genome context

chrX: 4610588-4610649 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from mdo-mir-7385b

Mature mdo-miR-7385b-5p

• Accession: MIMAT0028828
• Description: Monodelphis domestica mdo-miR-7385b-5p mature miRNA
• Sequence: 1 - AGGUCUGACAGUCUAUCUUCC - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7385b-3p

• Accession: MIMAT0028829
• Description: Monodelphis domestica mdo-miR-7385b-3p mature miRNA
• Sequence: 42 - AACAUAGUCUAUCGGACCUGG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45