Stem-loop mdo-mir-7385c

Accession

MI0023977

Description

Monodelphis domestica mdo-mir-7385c precursor miRNA

Sequence

28403 reads, 533 reads per million, 5 experiments

AGGUCUGAUACUCUAUCUUUCAgugauguucuaaaaccugGAACAUAGUUUGUCUGGCCUGG
(((((.((((..((((.((((((..............)))))).))))..)))).)))))..

Structure

--     U    CU    C      ugaugu 
  AGGUC GAUA  CUAU UUUCAg      u
  ||||| ||||  |||| ||||||       
  UCCGG CUGU  GAUA AAGguc      c
GG     U    UU    C      caaaau 

Annotation confidence High

Genome context

chrX: 4611475-4611536 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from mdo-mir-7385c

Mature mdo-miR-7385c-5p

• Accession: MIMAT0028830
• Description: Monodelphis domestica mdo-miR-7385c-5p mature miRNA
• Sequence: 1 - AGGUCUGAUACUCUAUCUUUCA - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7385c-3p

• Accession: MIMAT0028831
• Description: Monodelphis domestica mdo-miR-7385c-3p mature miRNA
• Sequence: 41 - GAACAUAGUUUGUCUGGCCUGG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45