Stem-loop mdo-mir-7385d

Accession

MI0023978

Description

Monodelphis domestica mdo-mir-7385d precursor miRNA

Sequence

6820 reads, 221 reads per million, 5 experiments

AGGUCUGAUAGUCUAUCUUCCugugcugucauaaaucuuggAGCAUAGUCUAUCCGGCCUGA
(((((.(((((.((((.((((..................)))).)))).))))).)))))..

Structure

--     U     U    C    ugugcugu 
  AGGUC GAUAG CUAU UUCC        c
  ||||| ||||| |||| ||||         
  UCCGG CUAUC GAUA GAgg        a
AG     C     U    C    uucuaaau 

Annotation confidence Medium

Genome context

chrX: 4611934-4611995 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from mdo-mir-7385d

Mature mdo-miR-7385d-5p

• Accession: MIMAT0028832
• Description: Monodelphis domestica mdo-miR-7385d-5p mature miRNA
• Sequence: 1 - AGGUCUGAUAGUCUAUCUUCC - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7385d-3p

• Accession: MIMAT0028833
• Description: Monodelphis domestica mdo-miR-7385d-3p mature miRNA
• Sequence: 42 - AGCAUAGUCUAUCCGGCCUGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45