Stem-loop mdo-mir-7386b

Accession

MI0023982

Description

Monodelphis domestica mdo-mir-7386b precursor miRNA

Sequence

1290 reads, 54 reads per million, 4 experiments

AGCUGGAUAAGGUACUCUAUUguacacguugucaaaAUGAGCACCUUAUCCAUAGAG
...((((((((((.(((..(((.(((...))))))...))).)))))))))).....

Structure

--AGC          A   -UA   u   c 
     UGGAUAAGGU CUC   UUg aca  
     |||||||||| |||   ||| ||| g
     ACCUAUUCCA GAG   aac ugu  
GAGAU          C   UAa   -   u 

Annotation confidence Not enough data

Genome context

chrX: 40472741-40472797 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from mdo-mir-7386b

Mature mdo-miR-7386b-5p

• Accession: MIMAT0028836
• Description: Monodelphis domestica mdo-miR-7386b-5p mature miRNA
• Sequence: 1 - AGCUGGAUAAGGUACUCUAUU - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7386b-3p

• Accession: MIMAT0028837
• Description: Monodelphis domestica mdo-miR-7386b-3p mature miRNA
• Sequence: 37 - AUGAGCACCUUAUCCAUAGAG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45