Stem-loop mdo-mir-7386j

Accession

MI0023987

Description

Monodelphis domestica mdo-mir-7386j precursor miRNA

Sequence

178 reads, 10 reads per million, 4 experiments

CCAUGGAUAGGGUGUUUUAUUUUgugaacauagccaaAAUAAACACCUUAUUCUUGGG
(((.(((((((((((((.((((((.(.......)))))))))))))))))))).))).

Structure

-   U             U      u aa 
 CCA GGAUAGGGUGUUU AUUUUg g  c
 ||| ||||||||||||| |||||| |  a
 GGU CUUAUUCCACAAA UAAaac c  u
G   U             -      - ga 

Annotation confidence Low

Genome context

chrX: 40482901-40482958 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from mdo-mir-7386j

Mature mdo-miR-7386j-5p

• Accession: MIMAT0028846
• Description: Monodelphis domestica mdo-miR-7386j-5p mature miRNA
• Sequence: 1 - CCAUGGAUAGGGUGUUUUAUUUU - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7386j-3p

• Accession: MIMAT0028847
• Description: Monodelphis domestica mdo-miR-7386j-3p mature miRNA
• Sequence: 38 - AAUAAACACCUUAUUCUUGGG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45