Stem-loop mdo-mir-7386k

Accession

MI0023988

Description

Monodelphis domestica mdo-mir-7386k precursor miRNA

Sequence

1275 reads, 52 reads per million, 4 experiments

UGUGGGCCAUGUUCUUCAAUUUGUagauuuucagcAAAGAAGUAUUUGGUCCAUAGA
(((((((((.((.((((..(((((.((...)).))))))))).)).)))))))))..

Structure

--         U  U    AA     a  u 
  UGUGGGCCA GU CUUC  UUUGU ga  
  ||||||||| || ||||  ||||| || u
  AUACCUGGU UA GAAG  AAAcg cu  
AG         U  U    --     a  u 

Annotation confidence Low

Genome context

chrX: 40484389-40484445 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from mdo-mir-7386k

Mature mdo-miR-7386k-5p

• Accession: MIMAT0028848
• Description: Monodelphis domestica mdo-miR-7386k-5p mature miRNA
• Sequence: 1 - UGUGGGCCAUGUUCUUCAAUUUGU - 24
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7386k-3p

• Accession: MIMAT0028849
• Description: Monodelphis domestica mdo-miR-7386k-3p mature miRNA
• Sequence: 36 - AAAGAAGUAUUUGGUCCAUAGA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45