Stem-loop mdo-mir-7389

Accession

MI0024000

Description

Monodelphis domestica mdo-mir-7389 precursor miRNA

Sequence

7004 reads, 395 reads per million, 4 experiments

GCUGUACUUGAAGCAAUUUUUUuuauaucuauuguaaaaaaAAAGUUGCAUCUUGAACAGCAG
(((((.(..((.((((((((((((.(((.....))).)))))))))))).))..).)))))..

Structure

--     A UU  A            a   c 
  GCUGU C  GA GCAAUUUUUUuu uau u
  ||||| |  || |||||||||||| ||| a
  CGACA G  CU CGUUGAAAaaaa aug u
GA     A UU  A            a   u 

Annotation confidence Not enough data

Genome context

chrX: 40514663-40514725 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from mdo-mir-7389

Mature mdo-miR-7389-5p

• Accession: MIMAT0028870
• Description: Monodelphis domestica mdo-miR-7389-5p mature miRNA
• Sequence: 1 - GCUGUACUUGAAGCAAUUUUUU - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7389-3p

• Accession: MIMAT0028871
• Description: Monodelphis domestica mdo-miR-7389-3p mature miRNA
• Sequence: 42 - AAAGUUGCAUCUUGAACAGCAG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45