Stem-loop mdo-mir-7388c

Accession

MI0024002

Description

Monodelphis domestica mdo-mir-7388c precursor miRNA

Sequence

25 reads, 3 reads per million, 2 experiments

UGCACAGACGUGACAUUUUAugucuuaugauuaAAAUAGUCACCUUUUGUGUAAC
((((((((.(((((((((((.(((....))))))))).)))))..))))))))..

Structure

--        -C     -      u   u 
  UGCACAGA  GUGAC AUUUUA guc u
  ||||||||  ||||| |||||| |||  
  AUGUGUUU  CACUG UAAAau uag a
CA        UC     A      -   u 

Annotation confidence Low

Genome context

chrX: 40516906-40516960 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from mdo-mir-7388c

Mature mdo-miR-7388c-5p

• Accession: MIMAT0028874
• Description: Monodelphis domestica mdo-miR-7388c-5p mature miRNA
• Sequence: 1 - UGCACAGACGUGACAUUUUA - 20
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7388c-3p

• Accession: MIMAT0028875
• Description: Monodelphis domestica mdo-miR-7388c-3p mature miRNA
• Sequence: 34 - AAAUAGUCACCUUUUGUGUAAC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45