Stem-loop mdo-mir-7385f

Accession

MI0024004

Description

Monodelphis domestica mdo-mir-7385f precursor miRNA

Sequence

54123 reads, 1183 reads per million, 5 experiments

AGGUCUGAUAGUCUAUCUUUUCAgugcucuuggaaacccugGAAUAUAGUCUAUCAGAUCUGG
(((((((((((.((((..((((((..............)))))).)))).)))))))))))..

Structure

--           U    CU      ugcucu 
  AGGUCUGAUAG CUAU  UUUCAg      u
  ||||||||||| ||||  ||||||       
  UCUAGACUAUC GAUA  AAGguc      g
GG           U    -U      ccaaag 

Annotation confidence High

Genome context

chrX: 4616510-4616572 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from mdo-mir-7385f

Mature mdo-miR-7385f-5p

• Accession: MIMAT0028878
• Description: Monodelphis domestica mdo-miR-7385f-5p mature miRNA
• Sequence: 1 - AGGUCUGAUAGUCUAUCUUUUCA - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7385f-3p

• Accession: MIMAT0028879
• Description: Monodelphis domestica mdo-miR-7385f-3p mature miRNA
• Sequence: 42 - GAAUAUAGUCUAUCAGAUCUGG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45