Stem-loop mdo-mir-7393

Accession

MI0024009

Description

Monodelphis domestica mdo-mir-7393 precursor miRNA

Sequence

894 reads, 49 reads per million, 4 experiments

CGAGUAUAUUUUGGUCACAUGguuaccuacaUGUGACCUUUGUAUACCCGUC
((.((((((...(((((((((........)))))))))...)))))).))..

Structure

--  A      UUU         guu 
  CG GUAUAU   GGUCACAUG   a
  || ||||||   |||||||||    
  GC CAUAUG   CCAGUGUac   c
CU  C      UUU         auc 

Annotation confidence Low

Genome context

chrX: 47653726-47653777 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from mdo-mir-7393

Mature mdo-miR-7393-5p

• Accession: MIMAT0028884
• Description: Monodelphis domestica mdo-miR-7393-5p mature miRNA
• Sequence: 1 - CGAGUAUAUUUUGGUCACAUG - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7393-3p

• Accession: MIMAT0028885
• Description: Monodelphis domestica mdo-miR-7393-3p mature miRNA
• Sequence: 32 - UGUGACCUUUGUAUACCCGUC - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45