Stem-loop mdo-mir-7397

Accession

MI0024013

Description

Monodelphis domestica mdo-mir-7397 precursor miRNA

Sequence

113 reads, 4 reads per million, 5 experiments

AAUCUGUUUGUCUUAGUGACAugugcaaauaaaggUGACCAAGACCCACAGAUUCC
(((((((..(((((.((.((.(((....)))...)).)).)))))..)))))))..

Structure

--       UU     A  G  --A   g 
  AAUCUGU  GUCUU GU AC   ugu c
  |||||||  ||||| || ||   |||  
  UUAGACA  CAGAA CA Ug   aua a
CC       CC     C  G  gaa   a 

Annotation confidence High

Genome context

chrX: 47672118-47672173 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from mdo-mir-7397

Mature mdo-miR-7397-5p

• Accession: MIMAT0028892
• Description: Monodelphis domestica mdo-miR-7397-5p mature miRNA
• Sequence: 1 - AAUCUGUUUGUCUUAGUGACA - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7397-3p

• Accession: MIMAT0028893
• Description: Monodelphis domestica mdo-miR-7397-3p mature miRNA
• Sequence: 36 - UGACCAAGACCCACAGAUUCC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45