Stem-loop mdo-mir-7398e

Accession

MI0024015

Description

Monodelphis domestica mdo-mir-7398e precursor miRNA

Sequence

407 reads, 7 reads per million, 5 experiments

AGUGUAGAGAAGGGUGAAAAUGCuguguucugucaggUAAUUCUCCCUUCUCUUACUGU
((((.(((((((((.(((....(((........)))....))).)))))))))))))..

Structure

--    U         U   AAUG   ugu 
  AGUG AGAGAAGGG GAA    Cug   u
  |||| ||||||||| |||    |||    
  UCAU UCUCUUCCC CUU    gac   c
UG    -         U   AAUg   ugu 

Annotation confidence Low

Genome context

chrX: 57276306-57276364 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from mdo-mir-7398e

Mature mdo-miR-7398e-5p

• Accession: MIMAT0028896
• Description: Monodelphis domestica mdo-miR-7398e-5p mature miRNA
• Sequence: 1 - AGUGUAGAGAAGGGUGAAAAUGC - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398e-3p

• Accession: MIMAT0028897
• Description: Monodelphis domestica mdo-miR-7398e-3p mature miRNA
• Sequence: 38 - UAAUUCUCCCUUCUCUUACUGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45