Stem-loop mdo-mir-7398a-1

Accession

MI0024017

Description

Monodelphis domestica mdo-mir-7398a-1 precursor miRNA

Sequence

748 reads, 12 reads per million, 5 experiments

UGUGUAGAGGCGAGAAAGAUACCguguugugucuuggUAAAUUUCUCGCCUUUCACAAU
((((.((((((((((((..(((((.(......).)))))..))))))))))))))))..

Structure

--    U            GA     u uu 
  UGUG AGAGGCGAGAAA  UACCg g  g
  |||| ||||||||||||  ||||| |   
  ACAC UUUCCGCUCUUU  AUggu c  u
UA    -            AA     u ug 

Annotation confidence High

Genome context

chrX: 57282764-57282822 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from mdo-mir-7398a-1

Mature mdo-miR-7398a-1-5p

• Accession: MIMAT0031051
• Description: Monodelphis domestica mdo-miR-7398a-1-5p mature miRNA
• Sequence: 1 - UGUGUAGAGGCGAGAAAGAUACC - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398a-3p

• Accession: MIMAT0028901
• Description: Monodelphis domestica mdo-miR-7398a-3p mature miRNA
• Sequence: 38 - UAAAUUUCUCGCCUUUCACAAU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45