Stem-loop mdo-mir-7398n

Accession

MI0024019

Description

Monodelphis domestica mdo-mir-7398n precursor miRNA

Sequence

4186 reads, 75 reads per million, 5 experiments

UGUGUGGAGGUAAGGAACUAUGCcguuuucucucucccgguAAAUCCUUGCCUCUCACAGU
((((.(((((((((((....(((((............)))))..)))))))))))))))..

Structure

--    U           ACUA     uuuuc 
  UGUG GGAGGUAAGGA    UGCcg     u
  |||| |||||||||||    |||||      
  ACAC UCUCCGUUCCU    Auggc     c
UG    -           --AA     ccucu 

Annotation confidence High

Genome context

chrX: 57284128-57284188 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from mdo-mir-7398n

Mature mdo-miR-7398n-5p

• Accession: MIMAT0028904
• Description: Monodelphis domestica mdo-miR-7398n-5p mature miRNA
• Sequence: 1 - UGUGUGGAGGUAAGGAACUAUGC - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398n-3p

• Accession: MIMAT0028905
• Description: Monodelphis domestica mdo-miR-7398n-3p mature miRNA
• Sequence: 42 - AAAUCCUUGCCUCUCACAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45