Stem-loop mdo-mir-7398k-1

Accession

MI0024020

Description

Monodelphis domestica mdo-mir-7398k-1 precursor miRNA

Sequence

28671 reads, 601.0 reads per million, 5 experiments

UGUGUGGAGGUAAGGAACUACGUCguguucucucuuucgGUAAAUCCUUUCCUCUCACUGU
.(((.(((((.(((((..(((..................)))..))))).))))))))...

Structure

--U   U     U     AC   GUCguguu 
   GUG GGAGG AAGGA  UAC        c
   ||| ||||| |||||  |||         
   CAC UCUCC UUCCU  AUG        u
UGU   -     U     AA   gcuuucuc 

Annotation confidence High

Genome context

ref|NC_077235.2|: 60119099-60119159 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from mdo-mir-7398k-1

Mature mdo-miR-7398k-5p

• Accession: MIMAT0028906
• Description: Monodelphis domestica mdo-miR-7398k-5p mature miRNA
• Sequence: 1 - UGUGUGGAGGUAAGGAACUACGUC - 24
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398k-1-3p

• Accession: MIMAT0028907
• Description: Monodelphis domestica mdo-miR-7398k-1-3p mature miRNA
• Sequence: 40 - GUAAAUCCUUUCCUCUCACUGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45