Stem-loop mdo-mir-7398o

Accession

MI0024022

Description

Monodelphis domestica mdo-mir-7398o precursor miRNA

Sequence

24464 reads, 399 reads per million, 5 experiments

UGUGUGGAGGUAAGGAACUACGCcguuuucucucugccgGUAAAUCCUUGCCUCUCACUUU
.(((.(((((((((((.....((((............))))...))))))))))))))...

Structure

--U   U           ACUAC    uuuuc 
   GUG GGAGGUAAGGA     GCcg     u
   ||| |||||||||||     ||||      
   CAC UCUCCGUUCCU     UGgc     c
UUU   -           --AAA    cgucu 

Annotation confidence Not enough data

Genome context

chrX: 57286131-57286191 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from mdo-mir-7398o

Mature mdo-miR-7398o-5p

• Accession: MIMAT0028908
• Description: Monodelphis domestica mdo-miR-7398o-5p mature miRNA
• Sequence: 1 - UGUGUGGAGGUAAGGAACUACGC - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398o-3p

• Accession: MIMAT0028909
• Description: Monodelphis domestica mdo-miR-7398o-3p mature miRNA
• Sequence: 40 - GUAAAUCCUUGCCUCUCACUUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45