Stem-loop mdo-mir-7398l

Accession

MI0024023

Description

Monodelphis domestica mdo-mir-7398l precursor miRNA

Sequence

1247 reads, 22 reads per million, 5 experiments

UUGUGUAGAGGUAAGAAAUAUGCuguguucucgcuugguAUAUUUCUUGCCUCUACCAAUU
(((.(((((((((((((((((((((((....)))..)))))))))))))))))))))))..

Structure

--   U                    --   u 
  UUG GUAGAGGUAAGAAAUAUGCu  gug u
  ||| ||||||||||||||||||||  |||  
  AAC CAUCUCCGUUCUUUAUAugg  cgc c
UU   -                    uu   u 

Annotation confidence Medium

Genome context

chrX: 57286820-57286880 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from mdo-mir-7398l

Mature mdo-miR-7398l-5p

• Accession: MIMAT0028910
• Description: Monodelphis domestica mdo-miR-7398l-5p mature miRNA
• Sequence: 1 - UUGUGUAGAGGUAAGAAAUAUGC - 23
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398l-3p

• Accession: MIMAT0028911
• Description: Monodelphis domestica mdo-miR-7398l-3p mature miRNA
• Sequence: 40 - AUAUUUCUUGCCUCUACCAAUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45