Stem-loop mdo-mir-7398m

Accession

MI0024024

Description

Monodelphis domestica mdo-mir-7398m precursor miRNA

Sequence

849 reads, 16 reads per million, 5 experiments

UGUGUAGAGGUAAGAAAUAUGCuguguucucgcuugguAUAUUUCUUGCCUCUACCAAU
((.(((((((((((((((((((((((....)))..))))))))))))))))))))))..

Structure

--  U                    --   u 
  UG GUAGAGGUAAGAAAUAUGCu  gug u
  || ||||||||||||||||||||  |||  
  AC CAUCUCCGUUCUUUAUAugg  cgc c
UA  -                    uu   u 

Annotation confidence High

Genome context

chrX: 57287463-57287521 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from mdo-mir-7398m

Mature mdo-miR-7398m-5p

• Accession: MIMAT0028912
• Description: Monodelphis domestica mdo-miR-7398m-5p mature miRNA
• Sequence: 1 - UGUGUAGAGGUAAGAAAUAUGC - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398m-3p

• Accession: MIMAT0028913
• Description: Monodelphis domestica mdo-miR-7398m-3p mature miRNA
• Sequence: 39 - AUAUUUCUUGCCUCUACCAAU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45