Stem-loop mdo-mir-7398c

Accession

MI0024025

Description

Monodelphis domestica mdo-mir-7398c precursor miRNA

Sequence

85 reads, 3 reads per million, 5 experiments

UGUGUAGAGGCAGGGAAAUAUGCUGuguuuucucuuucgGUAAAUCCUUGUUUCUCACAGU
((((.(((((((((((....(((((............)))))..)))))))))))))))..

Structure

--    U           AAUA     uguuu 
  UGUG AGAGGCAGGGA    UGCUG     u
  |||| |||||||||||    |||||      
  ACAC UCUUUGUUCCU    AUGgc     c
UG    -           --AA     uuucu 

Annotation confidence Not enough data

Genome context

chrX: 57288057-57288117 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from mdo-mir-7398c

Mature mdo-miR-7398c-5p

• Accession: MIMAT0028914
• Description: Monodelphis domestica mdo-miR-7398c-5p mature miRNA
• Sequence: 1 - UGUGUAGAGGCAGGGAAAUAUGCUG - 25
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398c-3p

• Accession: MIMAT0028915
• Description: Monodelphis domestica mdo-miR-7398c-3p mature miRNA
• Sequence: 40 - GUAAAUCCUUGUUUCUCACAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45