Stem-loop mdo-mir-7398a-3

Accession

MI0024028

Description

Monodelphis domestica mdo-mir-7398a-3 precursor miRNA

Sequence

729 reads, 12 reads per million, 5 experiments

UGUGUAGAGGCGAGAAAUAUGCUguguuguaucuuggUAAAUUUCUCGCCUUUCACAAU
((((.(((((((((((((.((((..(......)..)))).)))))))))))))))))..

Structure

--    U             A    gu uu 
  UGUG AGAGGCGAGAAAU UGCU  g  g
  |||| ||||||||||||| ||||  |   
  ACAC UUUCCGCUCUUUA AUgg  c  u
UA    -             A    uu ua 

Annotation confidence High

Genome context

chrX: 57293442-57293500 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from mdo-mir-7398a-3

Mature mdo-miR-7398a-3p

• Accession: MIMAT0028901
• Description: Monodelphis domestica mdo-miR-7398a-3p mature miRNA
• Sequence: 38 - UAAAUUUCUCGCCUUUCACAAU - 59
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398a-5p

• Accession: MIMAT0028900
• Description: Monodelphis domestica mdo-miR-7398a-5p mature miRNA
• Sequence: 1 - UGUGUAGAGGCGAGAAAUAUGCU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45