Stem-loop mdo-mir-7398a-5

Accession

MI0024030

Description

Monodelphis domestica mdo-mir-7398a-5 precursor miRNA

Sequence

706 reads, 12 reads per million, 5 experiments

UGUGUAGAGGCGAGAAAUAUGCCguguugugucuuggUAAAUUUCUCGCCUUUCACAAU
((((.(((((((((((((.(((((.(......).))))).)))))))))))))))))..

Structure

--    U             A     u uu 
  UGUG AGAGGCGAGAAAU UGCCg g  g
  |||| ||||||||||||| ||||| |   
  ACAC UUUCCGCUCUUUA AUggu c  u
UA    -             A     u ug 

Annotation confidence High

Genome context

chrX: 57293921-57293979 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from mdo-mir-7398a-5

Mature mdo-miR-7398a-3p

• Accession: MIMAT0028901
• Description: Monodelphis domestica mdo-miR-7398a-3p mature miRNA
• Sequence: 38 - UAAAUUUCUCGCCUUUCACAAU - 59
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398a-5-5p

• Accession: MIMAT0031054
• Description: Monodelphis domestica mdo-miR-7398a-5-5p mature miRNA
• Sequence: 1 - UGUGUAGAGGCGAGAAAUAUGCC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45