Stem-loop mdo-mir-7398d

Accession

MI0024033

Description

Monodelphis domestica mdo-mir-7398d precursor miRNA

Sequence

292 reads, 5 reads per million, 5 experiments

UGUGUAGAAGCAGGAAAAUAUGCCguguuuuaucuuggUAAAUCCUUGCUUCUCACCGU
.(((.(((((((((...((.(((((.(......).))))).)).))))))))))))...

Structure

--U   U         AAA  A     u uu 
   GUG AGAAGCAGG   AU UGCCg g  u
   ||| |||||||||   || ||||| |   
   CAC UCUUCGUUC   UA AUggu c  u
UGC   -         --C  A     u ua 

Annotation confidence Low

Genome context

chrX: 57297721-57297779 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from mdo-mir-7398d

Mature mdo-miR-7398d-5p

• Accession: MIMAT0028922
• Description: Monodelphis domestica mdo-miR-7398d-5p mature miRNA
• Sequence: 1 - UGUGUAGAAGCAGGAAAAUAUGCC - 24
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398d-3p

• Accession: MIMAT0028923
• Description: Monodelphis domestica mdo-miR-7398d-3p mature miRNA
• Sequence: 39 - UAAAUCCUUGCUUCUCACCGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45