Stem-loop mdo-mir-7398j

Accession

MI0024036

Description

Monodelphis domestica mdo-mir-7398j precursor miRNA

Sequence

80 reads, 2 reads per million, 4 experiments

UGUGUAGAGGGGAGUGAGGGUACCacgcacuaucgggUAACCUUUUCUACUCUCACAGU
((((.((((.((((.((((.((((.((......)))))).)))))))).))))))))..

Structure

--    U    G    U    G    a  ca 
  UGUG AGAG GGAG GAGG UACC cg  c
  |||| |||| |||| |||| |||| ||   
  ACAC UCUC UCUU UUCC AUgg gc  u
UG    -    A    -    A    -  ua 

Annotation confidence Not enough data

Genome context

chrX: 57306266-57306324 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from mdo-mir-7398j

Mature mdo-miR-7398j-5p

• Accession: MIMAT0028928
• Description: Monodelphis domestica mdo-miR-7398j-5p mature miRNA
• Sequence: 1 - UGUGUAGAGGGGAGUGAGGGUACC - 24
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7398j-3p

• Accession: MIMAT0028929
• Description: Monodelphis domestica mdo-miR-7398j-3p mature miRNA
• Sequence: 38 - UAACCUUUUCUACUCUCACAGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45