Stem-loop mdo-mir-7399

Accession

MI0024042

Description

Monodelphis domestica mdo-mir-7399 precursor miRNA

Sequence

27 reads, 2 reads per million, 2 experiments

CACAUACAUAUAUAGACGUGUAuguauaucuaaguaUACGCAUGUAUAUGUAUGCAUG
..((((((((((((..(((((((..........)))))))..))))))))))))....

Structure

--CA            GA       guau 
    CAUACAUAUAUA  CGUGUAu    a
    ||||||||||||  |||||||     
    GUAUGUAUAUGU  GCAUaug    u
GUAC            AC       aauc 

Annotation confidence Not enough data

Genome context

chrX: 57326899-57326956 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mdo-mir-7399

Mature mdo-miR-7399-5p

• Accession: MIMAT0028940
• Description: Monodelphis domestica mdo-miR-7399-5p mature miRNA
• Sequence: 1 - CACAUACAUAUAUAGACGUGUA - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7399-3p

• Accession: MIMAT0028941
• Description: Monodelphis domestica mdo-miR-7399-3p mature miRNA
• Sequence: 37 - UACGCAUGUAUAUGUAUGCAUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45