Stem-loop oan-let-7c-2

Accession

MI0024054

Description

Ornithorhynchus anatinus oan-let-7c-2 precursor miRNA

Literature search

1 open access papers mention oan-let-7c-2
(1 sentences)

Sequence

2423032 reads, 45150.0 reads per million, 5 experiments

UGAGGUAGUAGGUUGUAUGGUUuagagucacaccccgggaguuaaCUGUACAACCUUCUAGCUUUCC
.(((.(((.(((((((((((((..((.((.(......))).))))))))))))))).))).)))...

Structure

--U   G   U             ua  g  a ac 
   GAG UAG AGGUUGUAUGGUU  ga uc c  c
   ||| ||| |||||||||||||  || || |   
   UUC AUC UCCAACAUGUCaa  uu ag g  c
CCU   G   U             --  g  - gc 

Annotation confidence High

Genome context

11: 51824995-51825061 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from oan-let-7c-2

Mature oan-let-7c-5p

• Accession: MIMAT0028958
• Description: Ornithorhynchus anatinus oan-let-7c-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUGGUU - 22
• Evidence: experimental ; Illumina [1]

Mature oan-let-7c-3p

• Accession: MIMAT0028959
• Description: Ornithorhynchus anatinus oan-let-7c-3p mature miRNA
• Sequence: 46 - CUGUACAACCUUCUAGCUUUCC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45