Stem-loop oan-mir-30c-1

Accession

MI0024093

Description

Ornithorhynchus anatinus oan-mir-30c-1 precursor miRNA

Sequence

101644 reads, 2026 reads per million, 5 experiments

UGUAAACAUCCUACACUCUCAGCugucaagucaaggaggcUGGGAGAGGGUUGUUUACUCC
.(((((((.(((...(((((((((.((........))))))))))).))).)))))))...

Structure

--U       U   ACA         g  aag 
   GUAAACA CCU   CUCUCAGCu uc   u
   ||||||| |||   ||||||||| ||    
   CAUUUGU GGG   GAGGGUcgg ag   c
CCU       U   --A         -  gaa 

Annotation confidence Medium

Genome context

Ultra467: 480344-480404 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oan-mir-30c-1

Mature oan-miR-30c-5p

• Accession: MIMAT0006911
• Description: Ornithorhynchus anatinus oan-miR-30c-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCUCAGC - 23
• Evidence: experimental ; Illumina [1]

Mature oan-miR-30c-1-3p

• Accession: MIMAT0031028
• Description: Ornithorhynchus anatinus oan-miR-30c-1-3p mature miRNA
• Sequence: 41 - UGGGAGAGGGUUGUUUACUCC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45