Stem-loop gga-mir-7455

Accession

MI0024125

Description

Gallus gallus gga-mir-7455 precursor miRNA

Literature search

1 open access papers mention gga-mir-7455
(1 sentences)

Sequence

51 reads, 1 reads per million, 5 experiments

UCGCGCGGCGCGGAGGGAGCGGGcggugaauugccccCUUCCCUCCGUCGGCGCGCACAC
..(((((.(((((((((((.(((.(((.....))))))))))))))).)).)))))....

Structure

--UC     G  -         C   c   g 
    GCGCG CG CGGAGGGAG GGG ggu a
    ||||| || ||||||||| ||| ||| a
    CGCGC GC GCCUCCCUU Ccc ccg u
CACA     G  U         -   -   u 

Annotation confidence Not enough data

Comments

This sequence does not map exactly to the galGal4.0 chicken genome assembly, but is annotated based on a Trace Achive sequence (J_AD0151G21_t874e874.b1).

Genome context

chr2: 90394982-90395041 [-]

Mature gga-miR-7455-5p

• Accession: MIMAT0029064
• Description: Gallus gallus gga-miR-7455-5p mature miRNA
• Sequence: 1 - UCGCGCGGCGCGGAGGGAGCGGG - 23
• Evidence: experimental ; Illumina [1]

Mature gga-miR-7455-3p

• Accession: MIMAT0029065
• Description: Gallus gallus gga-miR-7455-3p mature miRNA
• Sequence: 38 - CUUCCCUCCGUCGGCGCGCACAC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45